Total Internal Reflection Fluorescence Microscopy
Interactive Java Tutorials
Polarized Light Evanescent Intensities
The light intensity at a TIRFM interface is a function of the illumination angle of incidence and the polarization of the incident light. This interactive tutorial explores how evanescent field intensities vary as a function of critical angle and the refractive index of the glass medium.
To operate the tutorial, use the Glass Refractive Index slider to change the refractive index value from a range of 1.45 to 1.78, corresponding to the differences between fused quartz and sapphire, respectively. As the slider is translated, the curves in the tutorial window display a change in both the critical angle and the relative intensities. Note how the evanescent field intensities drop as the refractive index and corresponding critical angle are decreased.
The p and s evanescent intensities are illustrated in the tutorial window as a function of incident angle for transmitted light in the lower refractive index medium when passed through an interface composed of a medium of variable refractive index (n(1) = 1.45-1.78) and water or an aqueous buffer solution (n(2) = 1.33). These calculations assume a condition of total internal reflection and require a critical angle of that is dependent upon the refractive index of the glass medium. Intensity, plotted on the ordinate, is expressed as the ratio of evanescent intensity at the interface (z equals zero) to the incident intensity for each polarization angle. It is interesting to note that the evanescent intensities for both polarization orientations exhibit a range between one and five times that of the plane wavefront incident intensity for angles within 15 degrees of the critical angle.
Daniel Axelrod - Department of Biophysics, University of Michigan, 930 North University Ave., Ann Arbor, Michigan 48109.
John C. Long and Michael W. Davidson - National High Magnetic Field Laboratory, 1800 East Paul Dirac Dr., The Florida State University, Tallahassee, Florida, 32310.
BACK TO TIR FLUORESCENCE MICROSCOPY
Questions or comments? Send us an email.
© 1995-2013 by
Michael W. Davidson
and The Florida State University.
All Rights Reserved. No images, graphics, software, scripts, or applets may be reproduced or used in any manner without permission from the copyright holders. Use of this website means you agree to all of the Legal Terms and Conditions set forth by the owners.
Last modification: Wednesday, Mar 26, 2014 at 02:24 PM
Access Count Since April 15, 2001: 15139
For more information on microscope manufacturers,
use the buttons below to navigate to their websites: